Package: compEpiTools
Type: Package
Title: Tools for computational epigenomics
Version: 1.46.0
Date: 2025-07-22
Authors@R: c(person("Mattia", "Pelizzola", role = "aut"), person("Kamal", "Kishore", role = "aut"), person("Mattia", "Furlan", email = "mattia.furlan@iit.it", role = c("ctb","cre")))
Description: Tools for computational epigenomics developed for the analysis, integration and simultaneous visualization of various (epi)genomics data types across multiple genomic regions in multiple samples.
License: GPL
Imports: AnnotationDbi, BiocGenerics, Biostrings, Rsamtools, parallel,
        grDevices, gplots, IRanges, GenomicFeatures, XVector,
        methylPipe, GO.db, S4Vectors, Seqinfo
Depends: R (>= 3.5.0), methods, topGO, GenomicRanges
Suggests: BSgenome.Mmusculus.UCSC.mm9,
        TxDb.Mmusculus.UCSC.mm9.knownGene, org.Mm.eg.db, knitr,
        rtracklayer
VignetteBuilder: knitr
biocViews: GeneExpression, Sequencing, Visualization, GenomeAnnotation,
        Coverage
git_url: https://git.bioconductor.org/packages/compEpiTools
git_branch: RELEASE_3_23
git_last_commit: 8502cd6
git_last_commit_date: 2026-04-28
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28
NeedsCompilation: no
Packaged: 2026-04-28 21:23:06 UTC; biocbuild
Author: Mattia Pelizzola [aut],
  Kamal Kishore [aut],
  Mattia Furlan [ctb, cre]
Maintainer: Mattia Furlan <mattia.furlan@iit.it>
Built: R 4.6.1; ; 2026-07-16 06:55:17 UTC; unix
