Index of Reference Cell Type Datasets

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Documentation for package ‘celldex’ version 1.14.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

BlueprintEncodeData	Obtain human bulk RNA-seq data from Blueprint and ENCODE
DatabaseImmuneCellExpressionData	Obtain human bulk RNA-seq data from DICE
fetchLatestVersion	List available references
fetchMetadata	Fetch a reference dataset
fetchReference	Fetch a reference dataset
HumanPrimaryCellAtlasData	Obtain the HPCA data
ImmGenData	Obtain mouse bulk expression data from the Immunologic Genome Project
listReferences	List available references
listVersions	List available references
MonacoImmuneData	Obtain bulk RNA-seq data of sorted human immune cells
MouseRNAseqData	Obtain mouse bulk expression data of sorted cell populations (RNA-seq)
NovershternHematopoieticData	Obtain bulk microarray expression for sorted hematopoietic cells
saveReference	Save a reference dataset
searchReferences	Search reference metadata
surveyReferences	Survey reference metadata