Package: BasicSTARRseq
Type: Package
Title: Basic peak calling on STARR-seq data
Version: 1.40.0
Date: 2025-07-24
Author: Annika Buerger
Maintainer: Annika Buerger <annika.buerger@ukmuenster.de>
Imports: S4Vectors,methods,IRanges,Seqinfo,stats
Depends: GenomicRanges,GenomicAlignments
Description: Basic peak calling on STARR-seq data based on a method
        introduced in "Genome-Wide Quantitative Enhancer Activity Maps
        Identified by STARR-seq" Arnold et al. Science. 2013 Mar
        1;339(6123):1074-7. doi: 10.1126/science. 1232542. Epub 2013
        Jan 17.
License: LGPL-3
Suggests: knitr
VignetteBuilder: knitr
biocViews: PeakDetection, GeneRegulation, FunctionalPrediction,
        FunctionalGenomics, Coverage
NeedsCompilation: no
git_url: https://git.bioconductor.org/packages/BasicSTARRseq
git_branch: RELEASE_3_23
git_last_commit: 62a053a
git_last_commit_date: 2026-04-28
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28
Packaged: 2026-04-28 20:44:32 UTC; biocbuild
Built: R 4.6.1; ; 2026-07-16 02:37:55 UTC; unix
