// ==========================================================================
//                 SeqAn - The Library for Sequence Analysis
// ==========================================================================
// Copyright (c) 2006-2026, Knut Reinert, FU Berlin
// All rights reserved.
//
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// modification, are permitted provided that the following conditions are met:
//
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//       notice, this list of conditions and the following disclaimer in the
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// ==========================================================================
// Author: David Weese <david.weese@fu-berlin.de>
// ==========================================================================
// Bit-packed pair specialization.
// ==========================================================================

#ifndef SEQAN_INCLUDE_SEQAN_BASIC_PAIR_BIT_PACKED_H_
#define SEQAN_INCLUDE_SEQAN_BASIC_PAIR_BIT_PACKED_H_

namespace seqan2 {

// ============================================================================
// Forwards
// ============================================================================

// ============================================================================
// Tags, Classes, Enums
// ============================================================================

/*!
 * @class BitPackedPair
 * @extends Pair
 * @headerfile <seqan/basic.h>
 * @brief Stores two arbitrary objects. Saves memory by packing bits with bit fields.
 *
 * @signature template <typename T1, typename T2, unsigned BITSIZE1, unsigned BITSIZE2>
 *            class Pass;
 *
 * @tparam T1       Type of first entry.
 * @tparam T2       Type of second entry.
 * @tparam BITSIZE1 Number of bits to store for <tt>T1</tt>.
 * @tparam BITSIZE2 Number of bits to store for <tt>T2</tt>.
 *
 * Useful for external storage.
 *
 * @section Remarks
 *
 * Memory access could be slower. Direct access to members by pointers is not allowed.
 *
 * Functions <tt>value()</tt> is not implemented yet since there it would require using a proxy. Use
 * <tt>getValue()</tt>, <tt>assignValue()</tt>, <tt>moveValue()</tt>, <tt>setValue()</tt> instead.
 */

#pragma pack(push,1)
#if defined(_MSC_VER) && _MSC_VER >= 1944
template <typename T1, typename T2, template <unsigned, unsigned> typename TSpec, int BITSIZE1, int BITSIZE2>
struct Pair<T1, T2, TSpec<BITSIZE1, BITSIZE2>>
#else
template <typename T1, typename T2, unsigned BITSIZE1, unsigned BITSIZE2>
struct Pair<T1, T2, BitPacked<BITSIZE1, BITSIZE2> >
#endif
{
    // ------------------------------------------------------------------------
    // Members
    // ------------------------------------------------------------------------

    T1 i1:BITSIZE1;
    T2 i2:BITSIZE2;

    // ------------------------------------------------------------------------
    // Constructors
    // ------------------------------------------------------------------------

    // bitfield member cannot have an in-class initializer, thus
    // `inline Pair() = default;` is not possible
    // https://gcc.gnu.org/bugzilla/show_bug.cgi?id=65132
    inline Pair() : i1(T1{}), i2(T2{}) {};
    inline Pair(Pair const &) = default;
    inline Pair(Pair &&) = default;
    inline Pair & operator=(Pair const &) = default;
    inline Pair & operator=(Pair &&) = default;
    inline ~Pair() = default;

    inline Pair(T1 const & _i1, T2 const & _i2) : i1(_i1), i2(_i2) {}

    template <typename T1_, typename T2_, typename TSpec__>
    // TODO(holtgrew): explicit?
    inline Pair(Pair<T1_, T2_, TSpec__> const &_p) :
        i1(getValueI1(_p)), i2(getValueI2(_p))
    {}
};
#pragma pack(pop)

// ============================================================================
// Metafunctions
// ============================================================================

// ============================================================================
// Functions
// ============================================================================

// ----------------------------------------------------------------------------
// Function set().
// ----------------------------------------------------------------------------

// References to members to packed structs do not work.  Always copy.

template <typename T1, typename T2, unsigned BITSIZE1, unsigned BITSIZE2>
inline void
set(Pair<T1, T2, BitPacked<BITSIZE1, BITSIZE2> > & p1, Pair<T1, T2, BitPacked<BITSIZE1, BITSIZE2> > & p2)
{
    p1 = p2;
}

// ----------------------------------------------------------------------------
// Function move().
// ----------------------------------------------------------------------------

// References to members to packed structs do not work.  Always copy.

template <typename T1, typename T2, unsigned BITSIZE1, unsigned BITSIZE2>
inline void
move(Pair<T1, T2, BitPacked<BITSIZE1, BITSIZE2> > & p1, Pair<T1, T2, BitPacked<BITSIZE1, BITSIZE2> > & p2)
{
    p1 = p2;
}

// -----------------------------------------------------------------------
// Function setValueIX()
// -----------------------------------------------------------------------

// Cannot be setValue with index since T1 can be != T2.

template <typename T1, typename T2, typename T, unsigned BITSIZE1, unsigned BITSIZE2>
inline void setValueI1(Pair<T1, T2, BitPacked<BITSIZE1, BITSIZE2> > & pair, T const & _i)
{
    pair.i1 = _i;
}

template <typename T1, typename T2, typename T, unsigned BITSIZE1, unsigned BITSIZE2>
inline void setValueI2(Pair<T1, T2, BitPacked<BITSIZE1, BITSIZE2> > & pair, T const & _i)
{
    pair.i2 = _i;
}

// -----------------------------------------------------------------------
// Function moveValueIX()
// -----------------------------------------------------------------------

// Cannot be moveValue with index since T1 can be != T2.

template <typename T1, typename T2, typename T, unsigned BITSIZE1, unsigned BITSIZE2>
inline void moveValueI1(Pair<T1, T2, BitPacked<BITSIZE1, BITSIZE2> > & pair, T & _i)
{
    pair.i1 = _i;
}

template <typename T1, typename T2, typename T, unsigned BITSIZE1, unsigned BITSIZE2>
inline void moveValueI2(Pair<T1, T2, BitPacked<BITSIZE1, BITSIZE2> > & pair, T & _i)
{
    pair.i2 = _i;
}

}  // namespace seqan2

#endif  // #ifndef SEQAN_INCLUDE_SEQAN_BASIC_PAIR_BIT_PACKED_H_
