R: Unsupervised Deconvolution of Tumor-Stromal Mixed Expressions

# Unsupervised Deconvolution of Tumor-Stromal Mixed Expressions

## Documentation for package ‘UNDO’ version 1.54.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS

## Help Pages

UNDO-package | Implementation of UNDO (unsupervised deconvolution of tumor-stromal mixed expressions)
BiologicalMixMCF7HS27 | MCF7 and HS27 biologically mixed
calc_E1 | function calculating the E1 measurement
dimension_reduction | Dimension reduction function
gene_expression_input | Detect whether the input gene expression data are valid
marker_gene_selection | Select marker genes in two sources
mixing_matrix_computation | Calculate and scale the mixing matrix
NumericalMixingMatrix | mixing matrix of data NumericalMixMCF7HS27
NumericalMixMCF7HS27 | MCF7 and HS27 numerically mixed
PureMCF7HS27 | pure MCF7 and HS27
two_source_deconv | Main function to call other subfunction to deconvolute the mixed expression data.
UNDO | Implementation of UNDO (unsupervised deconvolution of tumor-stromal mixed expressions)