Package: ExploreModelMatrix
Type: Package
Title: Graphical Exploration of Design Matrices
Version: 1.24.0
Date: 2026-03-16
Authors@R: c(person("Charlotte", "Soneson", role = c("aut", "cre"), 
    email = "charlottesoneson@gmail.com", 
    comment = c(ORCID = "0000-0003-3833-2169")),
    person("Federico", "Marini", role = "aut", 
    email = "marinif@uni-mainz.de",
    comment = c(ORCID = "0000-0003-3252-7758")),
    person("Michael", "Love", role = "aut", 
    email = "michaelisaiahlove@gmail.com",
    comment = c(ORCID = "0000-0001-8401-0545")),
    person("Florian", "Geier", role = "aut",
    email = "florian.geier@unibas.ch",
    comment = c(ORCID = "0000-0002-9076-9264")),
    person("Michael", "Stadler", role = "aut",
    email = "michael.stadler@fmi.ch",
    comment = c(ORCID = "0000-0002-2269-4934")))
Description: Given a sample data table and a design formula, 
    ExploreModelMatrix generates an interactive application 
    for exploration of the resulting design matrix. 
    This can be helpful for interpreting model coefficients and 
    constructing appropriate contrasts in (generalized) linear 
    models. Static visualizations can also be generated. 
License: MIT + file LICENSE
Encoding: UTF-8
Imports: shiny (>= 1.5.0), shinydashboard, DT, cowplot, utils, dplyr,
        magrittr, tidyr, ggplot2, stats, methods, rintrojs, scales,
        tibble, MASS, limma, S4Vectors, shinyjs, rlang
RoxygenNote: 7.3.3
Suggests: testthat (>= 2.1.0), knitr, rmarkdown, htmltools, BiocStyle
VignetteBuilder: knitr
URL: https://github.com/csoneson/ExploreModelMatrix
BugReports: https://github.com/csoneson/ExploreModelMatrix/issues
biocViews: ExperimentalDesign, Regression, DifferentialExpression,
        ShinyApps
git_url: https://git.bioconductor.org/packages/ExploreModelMatrix
git_branch: RELEASE_3_23
git_last_commit: fe30945
git_last_commit_date: 2026-04-28
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28
NeedsCompilation: no
Packaged: 2026-04-28 22:01:40 UTC; biocbuild
Author: Charlotte Soneson [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-3833-2169>),
  Federico Marini [aut] (ORCID: <https://orcid.org/0000-0003-3252-7758>),
  Michael Love [aut] (ORCID: <https://orcid.org/0000-0001-8401-0545>),
  Florian Geier [aut] (ORCID: <https://orcid.org/0000-0002-9076-9264>),
  Michael Stadler [aut] (ORCID: <https://orcid.org/0000-0002-2269-4934>)
Maintainer: Charlotte Soneson <charlottesoneson@gmail.com>
Built: R 4.6.0; ; 2026-04-30 06:58:42 UTC; unix
