Reading ReferenceID 0

Reading ReferenceID 4

--------------------------------------------------------------------------
SUMMARY STATISTICS OF THE READS
Total number of reads: 6198
Total number of paired-end reads: 0
Total number of properly paired reads: 0
Total number of unmapped reads : 0
Total number of reverse strand mapped reads: 4281
Total number of QC-failed reads : 0
Size of singleKeyMap (must be zero) : 0
Size of pairedKeyMap (must be zero) : 0
Total number of missing mates: 0
--------------------------------------------------------------------------
Sorting the indices of 2341 duplicated records

Writing wgEncodeCaltechRnaSeqGm12878R1x75dAlignsRep2V2_duprm.bam
Successfully marked 2341 unpaired and 0 paired duplicate reads

Dedup complete!
