R: CCMN and Other Normalization Methods for Metabolomics Data

# CCMN and Other Normalization Methods for Metabolomics Data

## Documentation for package ‘crmn’ version 0.0.21

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS

## Help Pages

crmn-package | CRMN
analytes | Accessor for the analytes
analytes-method | Accessor for the analytes
analytes-method | Accessor for the analytes
analytes_eset | Accessor for the analytes
analytes_other | Accessor for the analytes
crmn | CRMN
dropunusedlevels | Drop unused levels
makeX | Make X
makeX-method | Make X
makeX-methods | Make X
method | Accessor for the method
method-method | Accessor for the method
method-methods | Accessor for the method
mexprs | Matrix safe accessor of expression slot
mexprs-method | Matrix safe accessor of expression slot
mexprs-methods | Matrix safe accessor of expression slot
mexprs-rep-methods | Accessor
mexprs<- | Accessor
mexprs<--method | Accessor
mix | Dilution mixture dataset.
model | Accessor for the model
model-method | Accessor for the model
model-methods | Accessor for the model
nFit | Normalization model
nFit-class | Normalization model
normalize | Normalize a metabolomics dataset
normFit | Fit a normalization model
normPred | Predict for normalization
pcaMuffle | Muffle the pca function
plot-method | Plot a statistics for CRMN normalization model
plot.nFit | Plot a statistics for CRMN normalization model
sFit | Accessor for the standards model
sFit-method | Accessor for the standards model
show | Show method for nFit
show-method | Show method for nFit
show_nfit | Show nfit
standards | Accessor for the Internal Standards
standards-method | Accessor for the Internal Standards
standards-method | Accessor for the Internal Standards
standardsFit | Standards model
standardsPred | Predict effect for new data (or get fitted data)
standards_eset | Accessor for the Internal Standards
standards_other | Accessor for the Internal Standards
weightnorm | Normalize by sample weight