Package: calm
Type: Package
Title: Covariate Assisted Large-scale Multiple testing
Version: 1.26.0
Description: Statistical methods for multiple testing with covariate information. 
    Traditional multiple testing methods only consider a list of test statistics, 
    such as p-values. Our methods incorporate the auxiliary information, 
    such as the lengths of gene coding regions or the minor allele frequencies 
    of SNPs, to improve power.
Authors@R: person("Kun", "Liang", email = "kun.liang@uwaterloo.ca", role = c("aut", "cre"))
License: GPL (>=2)
Encoding: UTF-8
LazyData: false
Imports: mgcv, stats, graphics
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
biocViews: Bayesian, DifferentialExpression, GeneExpression,
        Regression, Microarray, Sequencing, RNASeq, MultipleComparison,
        Genetics, ImmunoOncology, Metabolomics, Proteomics,
        Transcriptomics
RoxygenNote: 6.1.1
BugReports: https://github.com/k22liang/calm/issues
git_url: https://git.bioconductor.org/packages/calm
git_branch: RELEASE_3_23
git_last_commit: 0cd22d0
git_last_commit_date: 2026-04-28
Repository: Bioconductor 3.23
Date/Publication: 2026-04-28
NeedsCompilation: no
Packaged: 2026-04-28 21:02:54 UTC; biocbuild
Author: Kun Liang [aut, cre]
Maintainer: Kun Liang <kun.liang@uwaterloo.ca>
Built: R 4.6.0; ; 2026-04-29 19:18:31 UTC; unix
