ABSDataSet              ABSDataSet object and constructors
ABSSeq                  Differential expression analysis based on the
                        total counts difference.
ABSSeqlm                Differential expression analysis for complex
                        desgin.
LevelstoNormFC          Accessors for the 'LevelstoNormFC' slot of a
                        ABSDataSet object.
ReplaceOutliersByMAD    Replacing outliers by moderated MAD
aFoldcomplexDesign      Calculate parameters for differential
                        expression test base on absolute counts
                        differences
callDEs                 Testing the differential expression by counts
                        difference
callParameter           Calculate parameters for differential
                        expression test base on absolute counts
                        differences
callParameterwithoutReplicates
                        Calculate parameters for differential
                        expression test base on absolute counts
                        differences without replicates
counts                  Accessors for the 'counts' slot of a ABSDataSet
                        object.
estimateSizeFactorsForMatrix
                        Low-level function to estimate size factors
                        with robust regression.
excounts                Accessors for the 'excounts' slot of a
                        ABSDataSet object.
genAFold                Calculate parameters for differential
                        expression test base on absolute counts
                        differences
groups                  Accessors for the 'groups' slot of a ABSDataSet
                        object.
maxRates                Accessors for the 'maxRates' slot of a
                        ABSDataSet object.
minRates                Accessors for the 'minRates' slot of a
                        ABSDataSet object.
minimalDispersion       Accessors for the 'minDispersion' slot of a
                        ABSDataSet object.
normMethod              Accessors for the 'normMethod' slot of a
                        ABSDataSet object.
normalFactors           Estimating size factors from the reads count
                        table
paired                  Accessors for the 'paired' slot of a ABSDataSet
                        object.
plotDifftoBase          Plot absolute log2 fold-change against base
                        mean of expression
qtotalNormalized        Estimating size factors from the reads count
                        table via ranking
results                 Accessor functions for the result from a
                        ABSDataSet
sFactors                Accessors for the 'sizeFactor' slot of a
                        ABSDataSet object.
simuN5                  Simulated study with random outliers
