ABarray                 Utility to perform QA, data transformation and
                        statistical analysis
ABarrayGUI              GUI for ABarray to perform QA, data
                        transformation and statistical analysis
calcsn                  Calculate SN summary for each group
concord                 Calculate signal detection concordance
cvv                     CV calculation
cvvPlot                 Plot CV value
doANOVA                 Perform one way or two way ANOVA
doLPE                   Perform LPE analysis
doPlotEset              Produce a number of QA plot plus t and ANOVA
                        test
doPlotFCT               Calculate fold change and t test, the plot
doVennDiagram           Create Venn Diagram
drawVennDiagram         Draw Venn Diagram
getMemberEset           Produce a sub ExpressionSet given a group and
                        its members
getPantherMap           Create pie chart for probes involved in Panther
                        Pathway
hclusterPlot            heatmap generation
icpPlot                 icp plot function
imputeFlag              Perform imputation for missing values (FLAG >
                        5000)
lpe.fdr.BH              Perform FDR on LPE results
mamaplot                MA plot function
matrixPlot              heatmap for matrix
mvaPair2                plot MA for each pair of columns
panel.cor               Create correlation panel
panel.scatter           Creat scatter plot
qnNormalize             Perform quantile normalization
rgcolorsfunc            generate color map
savejpg                 save device to jpg image file
scaleColorBar           Create scale for heatmap
snSummary               Create summary information for S/N ratio
